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flash-attention skill

by NousResearch·NousResearch/hermes-agent·263k stars·MIT

Speed up long-sequence transformer training and inference.

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Install the flash-attention skill

A skill is a folder. Copy it into your agent's skills folder and the agent loads it when the task matches its description.

git clone --depth 1 https://github.com/NousResearch/hermes-agent.git /tmp/hermes-agent
mkdir -p ~/.claude/skills
cp -r /tmp/hermes-agent/optional-skills/mlops/flash-attention ~/.claude/skills/flash-attention
available in every project

In the Claude apps, zip the folder and upload it from the Skills settings. The folder on GitHub

The instructions your agent would load

SKILL.md as published, without the frontmatter. Read it on GitHub

Flash Attention - Fast Memory-Efficient Attention

Quick start

Flash Attention provides 2-4x speedup and 10-20x memory reduction for transformer attention through IO-aware tiling and recomputation.

PyTorch native (easiest, PyTorch 2.2+):

import torch
import torch.nn.functional as F

q = torch.randn(2, 8, 512, 64, device='cuda', dtype=torch.float16)  # [batch, heads, seq, dim]
k = torch.randn(2, 8, 512, 64, device='cuda', dtype=torch.float16)
v = torch.randn(2, 8, 512, 64, device='cuda', dtype=torch.float16)

# Automatically uses Flash Attention if available
out = F.scaled_dot_product_attention(q, k, v)

flash-attn library (more features):

pip install flash-attn --no-build-isolation
from flash_attn import flash_attn_func

# q, k, v: [batch, seqlen, nheads, headdim]
out = flash_attn_func(q, k, v, dropout_p=0.0, causal=True)

Common workflows

Workflow 1: Enable in existing PyTorch model

Copy this checklist:

Flash Attention Integration:
- [ ] Step 1: Check PyTorch version (≥2.2)
- [ ] Step 2: Enable Flash Attention backend
- [ ] Step 3: Verify speedup with profiling
- [ ] Step 4: Test accuracy matches baseline

Step 1: Check PyTorch version

python -c "import torch; print(torch.__version__)"
# Should be ≥2.2.0

If <2.2, upgrade:

pip install --upgrade torch

Step 2: Enable Flash Attention backend

Replace standard attention:

# Before (standard attention)
attn_weights = torch.softmax(q @ k.transpose(-2, -1) / math.sqrt(d_k), dim=-1)
out = attn_weights @ v

# After (Flash Attention)
import torch.nn.functional as F
out = F.scaled_dot_product_attention(q, k, v, attn_mask=mask)

Force Flash Attention backend (torch.backends.cuda.sdpkernel is deprecated; use torch.nn.attention.sdpakernel with SDPBackend):

from torch.nn.attention import SDPBackend, sdpa_kernel

with sdpa_kernel(SDPBackend.FLASH_ATTENTION):
    out = F.scaled_dot_product_attention(q, k, v)

Step 3: Verify speedup with profiling

import torch.utils.benchmark as benchmark

def test_attention(use_flash):
    q, k, v = [torch.randn(2, 8, 2048, 64, device='cuda', dtype=torch.float16) for _ in range(3)]

    if use_flash:
        from torch.nn.attention import SDPBackend, sdpa_kernel
        with sdpa_kernel(SDPBackend.FLASH_ATTENTION):
            return F.scaled_dot_product_attention(q, k, v)
    else:
        attn = (q @ k.transpose(-2, -1) / 8.0).softmax(dim=-1)
        return attn @ v

# Benchmark
t_flash = benchmark.Timer(stmt='test_attention(True)', globals=globals())
t_standard = benchmark.Timer(stmt='test_attention(False)', globals=globals())

print(f"Flash: {t_flash.timeit(100).mean:.3f}s")
print(f"Standard: {t_standard.timeit(100).mean:.3f}s")

Expected: 2-4x speedup for sequences >512 tokens.

Step 4: Test accuracy matches baseline

# Compare outputs
q, k, v = [torch.randn(1, 8, 512, 64, device='cuda', dtype=torch.float16) for _ in range(3)]

# Flash Attention
out_flash = F.scaled_dot_product_attention(q, k, v)

# Standard attention
attn_weights = torch.softmax(q @ k.transpose(-2, -1) / 8.0, dim=-1)
out_standard = attn_weights @ v

# Check difference
diff = (out_flash - out_standard).abs().max()
print(f"Max difference: {diff:.6f}")
# Should be <1e-3 for float16

Workflow 2: Use flash-attn library for advanced features

For multi-query attention, sliding window, or H100 FP8.

Copy this checklist:

flash-attn Library Setup:
- [ ] Step 1: Install flash-attn library
- [ ] Step 2: Modify attention code
- [ ] Step 3: Enable advanced features
- [ ] Step 4: Benchmark performance

Step 1: Install flash-attn library

# NVIDIA GPUs (CUDA 12.0+)
pip install flash-attn --no-build-isolation

# Verify installation
python -c "from flash_attn import flash_attn_func; print('Success')"

Step 2: Modify attention code

from flash_attn import flash_attn_func

# Input: [batch_size, seq_len, num_heads, head_dim]
# Transpose from [batch, heads, seq, dim] if needed
q = q.transpose(1, 2)  # [batch, seq, heads, dim]
k = k.transpose(1, 2)
v = v.transpose(1, 2)

out = flash_attn_func(
    q, k, v,
    dropout_p=0.1,
    causal=True,  # For autoregressive models
    window_size=(-1, -1),  # No sliding window
    softmax_scale=None  # Auto-scale
)

out = out.transpose(1, 2)  # Back to [batch, heads, seq, dim]

Step 3: Enable advanced features

Multi-query attention (shared K/V across heads):

from flash_attn import flash_attn_func

# q: [batch, seq, num_q_heads, dim]
# k, v: [batch, seq, num_kv_heads, dim]  # Fewer KV heads
out = flash_attn_func(q, k, v)  # Automatically handles MQA

Sliding window attention (local attention):

# Only attend to window of 256 tokens before/after
out = flash_attn_func(
    q, k, v,
    window_size=(256, 256),  # (left, right) window
    causal=True
)

Step 4: Benchmark performance

import torch
from flash_attn import flash_attn_func
import time

q, k, v = [torch.randn(4, 4096, 32, 64, device='cuda', dtype=torch.float16) for _ in range(3)]

# Warmup
for _ in range(10):
    _ = flash_attn_func(q, k, v)

# Benchmark
torch.cuda.synchronize()
start = time.time()
for _ in range(100):
    out = flash_attn_func(q, k, v)
    torch.cuda.synchronize()
end = time.time()

print(f"Time per iteration: {(end-start)/100*1000:.2f}ms")
print(f"Memory allocated: {torch.cuda.max_memory_allocated()/1e9:.2f}GB")

Workflow 3: H100 FP8 optimization (FlashAttention-3)

For maximum performance on Hopper GPUs (H100).

Important: The pip package flash-attn (2.8.x) ships FlashAttention-2 only — it does

not contain FA3 or FP8 H100 kernels, and flashattnfunc does not auto-use FP8.

FlashAttention-3 is a separate beta build compiled from source from the repo's hopper/

directory, exposed via the flashattninterface module. FA3 supports FP16/BF16 forward+backward

and FP8 forward only.

FP8 Setup:
- [ ] Step 1: Verify Hopper (H100) GPU available
- [ ] Step 2: Build & install FlashAttention-3 from source (hopper/)
- [ ] Step 3: Use the FA3 interface (FP8 forward)

Step 1: Verify H100 GPU

nvidia-smi --query-gpu=name --format=csv
# Should show "H100" or "H800"

Step 2: Build & install FlashAttention-3 from source

FA3 is NOT included in pip install flash-attn. Build it from the hopper/ subdirectory:

git clone https://github.com/Dao-AILab/flash-attention.git
cd flash-attention/hopper
python setup.py install
# (compilation is heavy and requires a CUDA toolchain + Hopper GPU)

Step 3: Use the FA3 interface (FP8 forward)

FA3 exposes its own module flashattninterface (distinct from the FA2 flashattn). FP8 is a forward-only path and expects float8e4m3fn inputs:

import torch
from flash_attn_interface import flash_attn_func  # FA3 (hopper build), not `flash_attn`

# q, k, v: [batch, seqlen, nheads, headdim]
q = torch.randn(2, 4096, 32, 64, device='cuda', dtype=torch.float16)
k = torch.randn(2, 4096, 32, 64, device='cuda', dtype=torch.float16)
v = torch.randn(2, 4096, 32, 64, device='cuda', dtype=torch.float16)

# FP8 forward (inference / forward-only): cast to float8_e4m3fn
q_fp8 = q.to(torch.float8_e4m3fn)
k_fp8 = k.to(torch.float8_e4m3fn)
v_fp8 = v.to(torch.float8_e4m3fn)

out = flash_attn_func(q_fp8, k_fp8, v_fp8, causal=True)
# FP16/BF16 forward+backward is also supported by the FA3 interface.

When to use vs alternatives

Use Flash Attention when:

  • Training transformers with sequences >512 tokens
  • Running inference with long context (>2K tokens)
  • GPU memory constrained (OOM with standard attention)
  • Need 2-4x speedup without accuracy loss
  • Using PyTorch 2.2+ or can install flash-attn

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