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CLIO Hdf5 MCP server

by iowarp·io.github.iowarp/hdf5-mcp·v2.2.6·27 stars
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Open HDF5 files, browse groups, inspect datasets and attributes, and read or summarize data in...

B78/100grade B
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B78/100

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27 stars501 downloads/wk

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If you have run it, two minutes of your experience saves the next person an afternoon.

CLIO Hdf5 tools

No tool declarations could be read from the package source. They show once the server is installed.

Not scanned yet. New registry listings are scanned within a day of import.

Install CLIO Hdf5 in Claude Code, Cursor or VS Code

claude mcp add hdf5-mcp -- uvx clio-kit
Add to Cursor

What the publisher says

From the CLIO Hdf5 repository's README, as published. We do not edit it. Read it on GitHub

CLIO Kit

<!-- mcp-name: io.github.iowarp/adios-mcp --> <!-- mcp-name: io.github.iowarp/arxiv-mcp --> <!-- mcp-name: io.github.iowarp/chronolog-mcp --> <!-- mcp-name: io.github.iowarp/compression-mcp --> <!-- mcp-name: io.github.iowarp/darshan-mcp --> <!-- mcp-name: io.github.iowarp/geo-mcp --> <!-- mcp-name: io.github.iowarp/geojson-mcp --> <!-- mcp-name: io.github.iowarp/hdf5-mcp --> <!-- mcp-name: io.github.iowarp/jarvis-mcp --> <!-- mcp-name: io.github.iowarp/lmod-mcp --> <!-- mcp-name: io.github.iowarp/ndp-mcp --> <!-- mcp-name: io.github.iowarp/node-hardware-mcp --> <!-- mcp-name: io.github.iowarp/pandas-mcp --> <!-- mcp-name: io.github.iowarp/parallel-sort-mcp --> <!-- mcp-name: io.github.iowarp/paraview-mcp --> <!-- mcp-name: io.github.iowarp/parquet-mcp --> <!-- mcp-name: io.github.iowarp/plot-mcp --> <!-- mcp-name: io.github.iowarp/sac-mcp --> <!-- mcp-name: io.github.iowarp/scientific-catalog-mcp --> <!-- mcp-name: io.github.iowarp/seismic-mcp --> <!-- mcp-name: io.github.iowarp/slurm-mcp --> <!-- mcp-name: io.github.iowarp/spack-mcp --> <!-- mcp-name: io.github.iowarp/terrain-mcp --> <!-- mcp-name: io.github.iowarp/web-mcp -->

CLIO Kit - Part of the IoWarp platform's tooling layer for AI agents. A comprehensive collection of tools, skills, plugins, and extensions. It ships 22 Model Context Protocol (MCP) servers for scientific computing and enables AI agents to interact with HPC resources, scientific data formats, and research datasets.

Website | IOWarp

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Developed by Gnosis Research Center

❌ Without CLIO Kit

Working with scientific data and HPC resources requires manual scripting and tool-specific knowledge:

  • ❌ Write custom scripts for every HDF5/Parquet file exploration
  • ❌ Manually craft Slurm job submission scripts
  • ❌ Switch between multiple tools for data analysis
  • ❌ No AI assistance for scientific workflows
  • ❌ Repetitive coding for common research tasks

✅ With CLIO Kit

AI agents handle scientific computing tasks through natural language:

Shortened. The full README is on GitHub.

Nothing above is checked by us. What we check is on the safety report.

CLIO Hdf5: common questions

Is CLIO Hdf5 MCP server safe?
Mostly: it is graded B (78/100). Read the CLIO Hdf5 safety report
How do I install CLIO Hdf5?
It runs on your machine. Copy the Claude Code, Cursor, VS Code or Claude Desktop config from the install section.
Does CLIO Hdf5 need an API key?
Not as far as the registry entry and our scan can tell: no credentials are declared or required.
Is CLIO Hdf5 maintained?
The last commit was 27 days ago (2026-09-16). The latest release is v2.2.6.

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