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Neuro MCP server

by brain-bbqs·io.github.brain-bbqs/neuro-mcp·v1.1.1

Neuroscience MCP server (Python) for the BBQS at McGovern Institute of Brain Research

C65/100grade C
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C65/100

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If you have run it, two minutes of your experience saves the next person an afternoon.

Neuro tools (36, 1 write)

write = sends, deletes, buys or posts

Read from the package source without running it. The installed server may list more.

  • check_bids_structure

    Check what type of BIDS structure a path represents.

  • check_nwb_compatibility

    Check if data format is compatible with NWB conversion.

  • check_upload_readinesswrite action

    Check if a dataset meets BIDS compliance requirements.

  • convert_hed_to_long_form

    Convert HED tags from short to long form.

  • get_behavioral_categories

    Get common behavioral categories from NBO.

  • get_device_specs

    Get specifications for a neural recording device.

  • get_hed_best_practices

    Get HED tagging best practices and guidelines.

  • get_hed_examples

    Get example HED tag strings for common experimental events.

  • get_hed_info

    Get information about HED (Hierarchical Event Descriptors).

  • get_hed_schema_info

    Get information about a HED schema version.

  • get_nbo_examples

    Get example code for working with NBO ontology.

  • get_nbo_info

    Get information about NBO (Neuro Behavior Ontology).

  • get_nwb_data_types

    List available NWB data types and modules.

  • get_nwb_examples

    Get example code snippets for common NWB operations.

  • get_nwb_info

    Get information about NWB (Neurodata Without Borders) format.

  • get_provider_info

    Get detailed information about a specific provider.

  • get_scientist_prompts

    Get example prompts scientists can use for testing brain imaging data.

  • list_bids_examples

    List example valid BIDS file paths for reference.

  • list_device_types

    List supported neural device types.

  • list_ontologies

    List available neuroscience ontologies.

  • list_ontology_subproviders

    List available ontology subproviders and their status.

  • list_providers

    List all registered neuroscience package providers.

  • load_nbo_ontology

    Load the NBO ontology using owlready2.

  • quality_control_dataset

    Perform comprehensive quality control on a BIDS dataset.

  • search_hed_tags

    Search for HED tags matching a query.

  • search_nbo_terms

    Search for terms in the NBO ontology.

  • standardize_term

    Standardize a neuroscience term from one format to another.

  • translate_data_format

    Translate neural data between device formats.

  • validate_bids_dataset

    Validate multiple file paths in a BIDS dataset.

  • validate_bids_path

    Validate if a file path adheres to BIDS structure.

  • validate_hed_events_file

    Validate HED annotations in an events file structure.

  • validate_hed_string

    Validate a HED tag string.

  • validate_nbo_term

    Validate if a term exists in the NBO ontology.

  • validate_nwb_structure

    Validate if a data description follows NWB best practices.

  • validate_recording_params

    Validate recording parameters for a neural device.

  • validate_term

    Validate a neuroscience term against an ontology.

Public scan report

scanner v0.1.10 · 2026-10-01 · same rubric, same numbers if you re-run it

no findings
  • Code scan26 source files scanned25/25
  • –Live reliabilityno gateway calls yet and no remote to proben/a
  • –Tool poisoningtools not inspected (local package is not executed); not countedn/a
  • Auth qualitylocal package, no credentials required12/15
  • Maintenancerepository not readable: repo not found3/15
  • Maintainer identityno repository or website to verify2/10
Overall 65/100. Components that don't apply are left out of the denominator. Any critical finding is an F.RubricAppeal a findingJSON

Install Neuro in Claude Code, Cursor or VS Code

Runs npx -y @brain-bbqs/neuro-mcp on your machine. Read the scan report first; the gateway never runs local packages.

claude mcp add neuro-mcp -- npx -y @brain-bbqs/neuro-mcp
Add to Cursor

Neuro: common questions

Is Neuro MCP server safe?
With care: it is graded C, so read the findings first (65/100). Read the Neuro safety report
How do I install Neuro?
It runs on your machine. Copy the Claude Code, Cursor, VS Code or Claude Desktop config from the install section.
Does Neuro need an API key?
Not as far as the registry entry and our scan can tell: no credentials are declared or required.
Is Neuro maintained?
The latest release is v1.1.1.

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